[Gramene] Re: TAIR9 vs TAIR10 - mixup on naming, was: RE: Old versions?

[Ann Loraine]

I contacted TAIR to get their input.

Probably I can give you a final answer as to what name to use later on
today.

Thanks for offering to make the change!

-Ann


On 6/30/11 6:33 AM, "Dan Staines" <dstaines at ebi.ac.uk> wrote:

> 
>> Genome assembly names cause us endless problems, and we only look after a few
>> of them!
> 
> Seconded from my end...
> 
>> Ann; you would like us to use 'A_thaliana_Jun_2009' as the assembly name? If
>> so I will patch the databases, and we will also need Dan Staines to do the
>> same over at Ensembl Genomes.
>> 
>> Jonathan; as an 'independent' who has an interest in such things, what would
>> your preference for assembly naming conventions be? Are there standards
>> groups already considering this problem?
> 
> If someone can tell me a definitive assembly name to use, I'll be able
> to make the change, though the window for doing this in time for our
> next release (currently 12th July) is very tight.
> 
> Cheers,
> 
> Dan.

-- 
Ann Loraine
Associate Professor
Dept. of Bioinformatics and Genomics, UNCC
North Carolina Research Campus
600 Laureate Way
Kannapolis, NC 28081
704-250-5750 (office)
http://www.transvar.org