. ./fasta ./fasta/sorghum_pi543243ph256 ./fasta/sorghum_pi543243ph256/dna ./fasta/sorghum_pi543246phb279 ./fasta/sorghum_pi543246phb279/dna ./fasta/sorghum_pi543247phb349 ./fasta/sorghum_pi543247phb349/dna ./fasta/sorghum_pi544069ph352 ./fasta/sorghum_pi544069ph352/dna ./fasta/sorghum_pi554646ph288 ./fasta/sorghum_pi554646ph288/dna ./fasta/sorghum_pi554647ph355 ./fasta/sorghum_pi554647ph355/dna ./fasta/sorghum_pi554648ph356 ./fasta/sorghum_pi554648ph356/dna ./fasta/sorghum_pi554649ph410 ./fasta/sorghum_pi554649ph410/dna ./fasta/sorghum_pi554650ph449 ./fasta/sorghum_pi554650ph449/dna ./fasta/sorghum_pi554652phb429 ./fasta/sorghum_pi554652phb429/dna ./fasta/sorghum_pi554654phb432 ./fasta/sorghum_pi554654phb432/dna ./fasta/sorghum_pi555457phb331 ./fasta/sorghum_pi555457phb331/dna ./fasta/sorghum_pi562621ph538 ./fasta/sorghum_pi562621ph538/dna ./fasta/sorghum_pi562622phb122 ./fasta/sorghum_pi562622phb122/dna ./fasta/sorghum_pi562623phb118 ./fasta/sorghum_pi562623phb118/dna ./fasta/sorghum_pi562624pha118 ./fasta/sorghum_pi562624pha118/dna ./fasta/sorghum_pi562625pha122 ./fasta/sorghum_pi562625pha122/dna ./fasta/sorghum_pi574398pha651 ./fasta/sorghum_pi574398pha651/dna ./fasta/sorghum_pi574406pha151 ./fasta/sorghum_pi574406pha151/dna ./fasta/sorghum_pi574407phb151 ./fasta/sorghum_pi574407phb151/dna ./fasta/sorghum_pi594354phwiabqe ./fasta/sorghum_pi594354phwiabqe/dna ./fasta/sorghum_pi594355phb1cgqf ./fasta/sorghum_pi594355phb1cgqf/dna ./fasta/sorghum_pi596332ph387lm ./fasta/sorghum_pi596332ph387lm/dna ./fasta/sorghum_pi596567ph4knye ./fasta/sorghum_pi596567ph4knye/dna ./fasta/sorghum_pi601264ph227 ./fasta/sorghum_pi601264ph227/dna ./fasta/sorghum_pi601415ph232 ./fasta/sorghum_pi601415ph232/dna ./fasta/sorghum_pi601553ph257 ./fasta/sorghum_pi601553ph257/dna ./fasta/sorghum_pi601554ph289 ./fasta/sorghum_pi601554ph289/dna ./fasta/sorghum_pi601555ph308 ./fasta/sorghum_pi601555ph308/dna ./fasta/sorghum_pi601556ph309 ./fasta/sorghum_pi601556ph309/dna ./fasta/sorghum_pi601557ph310 ./fasta/sorghum_pi601557ph310/dna ./fasta/sorghum_pi601716ph328 ./fasta/sorghum_pi601716ph328/dna ./fasta/sorghum_pi601717ph333 ./fasta/sorghum_pi601717ph333/dna ./fasta/sorghum_pi601718pha82 ./fasta/sorghum_pi601718pha82/dna ./fasta/sorghum_pi601719pha86 ./fasta/sorghum_pi601719pha86/dna ./fasta/sorghum_pi601720phb82 ./fasta/sorghum_pi601720phb82/dna ./fasta/sorghum_pi601721phb86 ./fasta/sorghum_pi601721phb86/dna ./fasta/sorghum_pi602599phbcwnl ./fasta/sorghum_pi602599phbcwnl/dna ./fasta/sorghum_pi602600phbepoyj ./fasta/sorghum_pi602600phbepoyj/dna ./gff3 ./gff3/sorghum_pi543246phb279 ./gff3/sorghum_pi543243ph256 ./gff3/sorghum_pi554646ph288 ./gff3/sorghum_pi544069ph352 ./gff3/sorghum_piI543247phb349 ./gff3/sorghum_pi554649ph410 ./gff3/sorghum_pi554648ph356 ./gff3/sorghum_pi554647ph355 ./gff3/sorghum_pi554654phb432 ./gff3/sorghum_pi554652phb429 ./gff3/sorghum_pi562621ph538 ./gff3/sorghum_pi561926r160 ./gff3/sorghum_pi555457phb331 ./gff3/sorghum_pi562624pha118 ./gff3/sorghum_pi562623phb118 ./gff3/sorghum_pi562622phb122 ./gff3/sorghum_pi574398pha651 ./gff3/sorghum_pi564085wkmiii ./gff3/sorghum_pi562625pha122 ./gff3/sorghum_pi594354phqiabqe ./gff3/sorghum_pi574407phb151 ./gff3/sorghum_pi574406pha151 ./gff3/sorghum_pi596332ph387lm ./gff3/sorghum_pi595221excels235 ./gff3/sorghum_pi594355phb1cgqf ./gff3/sorghum_pi601415ph232 ./gff3/sorghum_pi601264ph227 ./gff3/sorghum_pi554650ph449 ./gff3/sorghum_pi601554ph289 ./gff3/sorghum_pi601552a8087c ./gff3/sorghum_pi596567ph4knye ./gff3/sorghum_pi601557ph310 ./gff3/sorghum_pi601556ph309 ./gff3/sorghum_pi601555ph308 ./gff3/sorghum_pi601553ph257 ./gff3/sorghum_pi601719pha86 ./gff3/sorghum_pi601718pha82 ./gff3/sorghum_pi601716ph328 ./gff3/sorghum_pi601743hp150 ./gff3/sorghum_pi601721phb86 ./gff3/sorghum_pi601717ph333 ./gff3/sorghum_pi602600phbepoyj ./gff3/sorghum_pi602599phbcwnl ./gff3/sorghum_pi601756r145 ./gff3/sorghum_pi601744r159 ./gff3/sorghum_pi601720phb82 ./variation